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RNA sequencing analysis of metabolism related genes in MKRN1-null mice tissues.
Analysis of metabolism related gene expression in liver and adipose tissues from MKRN1 knockout mice.
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Hyun-Ji HanMin-sik LeeSu HanJaewhan Song
Reused by
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
Illumina HiSeq 4000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
8 / 8 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
77036577188
reported
total reads
381369194
reported
supplementary file types
GTF
reported
QC cost
13 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently