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RNA-seq CELSR2 knockdown vs NTC
RNA-seq experiments in two B-lineage leukemia cell lines (NALM6 and 697) either 0hr prednisilone treated or 24hr prednisolone treated in either NTC or CELSR2 knockdown (240-1)
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Robert J AutryWilliam E Evans
Reused by
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 4000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
24 / 24 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
212537850554
reported
total reads
1052167577
reported
supplementary file types
TXT
reported
QC cost
5 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently