Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
← Dataset search

GSE115384

GEO first seen 2020

RNA-seq CELSR2 knockdown vs NTC

Organism
Homo sapiens
Samples
24
Type
Expression profiling by high...
Submitted
2018-06-05

RNA-seq experiments in two B-lineage leukemia cell lines (NALM6 and 697) either 0hr prednisilone treated or 24hr prednisolone treated in either NTC or CELSR2 knockdown (240-1)

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Robert J AutryWilliam E Evans
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 4000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
24 / 24 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 212537850554 reported
total reads 1052167577 reported
supplementary file types TXT reported
QC cost 5 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently