Alveolar Macrophages after Murine Lung Transplant
The objective of this study was to examine transcriptional changes in alveolar macrophages early after reperfusion in a model of murine lung transplant.
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- A Beginner’s Guide to Analysis of RNA Sequencing Data 2018 · 171 cites
Deep data QC
100/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Bulk RNA-seq of Mus musculus via NextSeq 500 with good base quality (94.1% Q30, 0.012% N content) and confirmed GEO UID. This dataset supports mouse gene expression studies with a mid-throughput platform enabling moderate multiplex efficiency. The consistent quality metrics enable reliable transcript quantification and differential expression analysis.
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0