Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE116681

GEO first seen 2018

Gene expression profiling shows that a jaz decuple mutation (jazD) promotes expression of defense-related genes while inhibiting expression of growth-related genes

Organism
Arabidopsis thaliana
Samples
9
Type
Expression profiling by high...
Submitted
2018-07-05

The decuple jaz mutation (jazD) affects plant growth and defense. We used RNA-sequencing to query the transcriptomes of a jaz quintuple mutant (jazQ) and jazD, and examined how these mutations alter the expression of growth- and defense-associated genes in comparison to wild-type Col-0 plants. The data highlight how jasmonate pathways contribute to growth and defense.

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Qiang GuoGregg A Howe

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently