Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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GSE117770

GEO first seen 2023

Targeted elimination of senescent beta cells prevents Type 1 Diabetes

Organism
Mus musculus
Samples
9
Type
Expression profiling by high...
Submitted
2018-07-27

scRNA-seq of Islets isolated from 8, 14 and 16 week NOD mice

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Ajit ShahPeter ThompsonAnil Bhushan
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
Illumina NovaSeq 6000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads), BAM/CRAM (aligned)
N numbers (samples, groups)
9 / 9 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 491091824041 reported
total reads 5396613451 reported
supplementary file types MTX, TSV reported
QC cost 13 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently