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Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage (RNA-seq)
Small cell carcinomas from different tissues exhibit transcriptional and epigenetic convergence and suggest common vulnerabilities for therapies
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Jung W Park
Reused by
- Binary pan-cancer classes with distinct vulnerabilities defined... 2021 · 175 cites
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 3000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
36 / 36 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
715156827628
reported
total reads
2470213118
reported
supplementary file types
TAR
reported
QC cost
14 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently