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Quantitative Analysis of p53 and/or TGFBR2 Knockdown Endothelial Transcriptomes after Irradiation
Transcriptional profiling p53 or TGFBR2 knockdown HUVECs with or without irradiation.
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Yoon-Jin LeeSeo-Hyun Choi
Reused by
- Tumour-vasculature development via endothelial-to-mesenchymal tr... 2018 · 125 cites
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 2500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
8 / 8 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
51221412296
reported
total reads
253571348
reported
supplementary file types
TXT
reported
QC cost
14 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently