GSE119145

Effect of TGF-beta treatment on circRNAs biogenesis

Organism

Homo sapiens

Samples

6

Type

Expression profiling by high...

Submitted

2018-08-28

circRNAs profile were examined upon TGF-beta treatment in A549 cells

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by

Leng HanYu Xiang

Reused by

Comprehensive characterization of circular RNAs in ~ 1000 human... 2019 · 171 cites

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay

bulk-RNA-seq

Organism

Homo sapiens

Instrument

Illumina HiSeq 2000

Platform

ILLUMINA

Read type

short-read

Files available

FASTQ (raw reads)

N numbers (samples, groups)

6 / 6 runs

Completeness

100%

Metrics (value · how obtained)

checksum ok yes reported

total bases 127995941100 reported

total reads 426653137 reported

supplementary file types TXT reported

QC cost 6 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently