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Effect of neuronal primary cilia on axonal tract development
This experiment aims to study the impact of primary cilia signaling on transcriptional programs relevant to axonal development in the mouse cerebral cortex.
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Eva S AntonJiami GuoTravis S PtacekJeremy M Simon
Reused by
- Primary Cilia Signaling Promotes Axonal Tract Development and Is... 2019 · 113 cites
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
Illumina HiSeq 2500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
6 / 6 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
28937285294
reported
total reads
289685771
reported
supplementary file types
TXT
reported
QC cost
8 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently