Corpus 1,284 assessed · 1,185 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
← Dataset search

GSE120665

GEO first seen 2018

ChIP-Chip tiling array for Rad21 in RAG cells (renal adenocarcinoma) over mouse Pax6 gene region. Agilent ChIP-chip, Agilent 4x180K.

Organism
Mus musculus
Samples
2
Type
Genome binding/occupancy pro...
Submitted
2018-09-30

Rad21 ChIP-ChIP in renal adenocarcinoma RAG cells, using custom tilling array covering Pax6 mm9 (Chr2:103500000-107499954) mm9. This study is part of a large data set study gene regulotry mechnism in the Pax6 locus and complements other ChIP-ChIP data.

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Adam BuckleChris BrackleyShelagh BoyleDavide MarenduzzoNick Gilbert
Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently