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Nrf2 ChIP-seq data of Nrf2KO, wild-type and Keap1KO esophagus
To understand how hyperactive NRF2 causes the esophageal phenotype in mice.
Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Zhaohui XiongXiaoxin Chen
Reused by
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
insufficient data to scoreStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
ChIP-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct
0.002
measured
pct q20 bases
95.5
measured
pct q30 bases
93.9
measured
gc content pct
43.2
measured
mean read length
75
measured
mean base quality
34.3
measured
adapter content pct
0.29
measured
duplication rate pct
5.79
measured
How this grade was computed
The insufficient grade is a transparent weighted average. Each metric below scored from 0–100% against the published ChIP-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
93.9
measured
×1
100%
QC cost
27 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0