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Genome-wide methyl-cytosine competition by DNMT and TET
Organism
Homo sapiens; Mus musculus
Samples
42
Type
Methylation profiling by hig...
Submitted
2019-02-22
We define distinct methylated elements that recruit both DNMT3A/B and TETs. We also show the genome-wide activity of DNMTs and TETs.
Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Jocelyn CharltonAlexander Meissner
Reused by
- Self-patterning of human stem cells into post-implantation linea... 2023 · 144 cites
- TETs compete with DNMT3 activity in pluripotent cells at thousan... 2020 · 120 cites
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
QC cost
23 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently