Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE130242

GEO first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human bulk RNA-seq generated with 75.5 bp reads and good quality depth (94.6% Q30, 96.4% Q20) supports robust expression quantification and splicing analysis. The moderate read length provides reasonable coverage for exon-level expression studies. This dataset is suitable for reuse in comparative transcriptomics and studies requiring sensitive gene expression measurement.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.007 measured
pct q20 bases 96.4 measured
pct q30 bases 94.6 measured
gc content pct 49 measured
mean read length 75.5 measured
mean base quality 34.5 measured
adapter content pct 0 measured
duplication rate pct 26.06 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 94.6 measured ×1 100%
mean base quality 34.5 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 26.06 measured ×0.4 100%
QC cost 24 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0