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Effect of Omomyc treatment on MYC mediated transcription
Purpose: Identify MYC sensitive enes that are affected by treatment with Omomyc
Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Mark DemmaSarah Javid
Reused by
- Omomyc Reveals New Mechanisms To Inhibit the MYC Oncogene 2019 · 91 cites
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 2000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
30 / 30 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
197646379091
reported
total reads
2016950295
reported
supplementary file types
TXT
reported
QC cost
7 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently