Corpus 1,284 assessed · 1,185 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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GSE131408

GEO first seen 2020

The Ccr4-Not complex monitors the translating ribosome for codon optimality

Organism
Saccharomyces cerevisiae
Samples
4
Type
Other
Submitted
2019-05-17

Control of messenger RNA (mRNA) decay rate is intimately connected to translation elongation, but the spatial coordination of these events is poorly understood. The Ccr4-Not complex initiates mRNA decay through deadenylation and activation of decapping. We used a combination of cryo–electron microscopy, ribosome profiling, and mRNA stability assays to examine the recruitment of Ccr4-Not to the ribosome via specific interaction of the Not5 subunit with the ribosomal E-site in Saccharomyces cerevi...

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Robert BuschauerYoshitaka MatsuoTakato SugiyamaYing-Hsin ChenNajwa AlhusainiThomas SweetKen IkeuchiJingdong ChengYasuko MatsukiRisa NobutaAndrea GilmozziOtto BerninghausenPetr TesinaThomas BeckerJeff CollerToshifumi InadaRoland Beckmann

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 24 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently