Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
← Dataset search

GSE135893

GEO first seen 2021

Single-cell RNA-sequencing reveals profibrotic roles of distinct epithelial and mesenchymal lineages in pulmonary fibrosis

Organism
Homo sapiens
Samples
34
Type
Expression profiling by high...
Submitted
2019-08-16

Pulmonary fibrosis (PF) is a form of chronic lung disease characterized by progressive destruction of normal alveolar gas-exchange surfaces and accumulation of extracellular matrix (ECM). In order to comprehensively define the cell types, mechanisms and mediators driving ECM deposition and fibrotic remodeling in lungs with pulmonary fibrosis, we performed single-cell RNA-sequencing (scRNA-seq) of single-cell suspensions generated from non-fibrotic control and PF lungs. Analysis of over 114,000 c...

Provenance — who produced it, who reused it

Linked to 29 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Arun C HabermannAustin J GutierrezLinh T BuiNichelle I WintersCarla L CalviLance PeterMei-I ChungChase J TaylorStephanie L YahnChristopher JetterLatha RajuJamie RobersonGuixiao DingLori WoodJennifer M SucreBradley W RichmondAna P SerezaniWyatt J McDonnellSimon B MallalMatthew J BacchettaCiara M ShaverLorraine B WareRoss BremnerRajat WaliaTimothy S BlackwellNicholas E BanovichJonathan A Kropski
Reused by

25 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 19 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently