GSE137446

GEO first seen 2020

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Absolute Quantification of Transcription Factors Reveals Princip... 2020 · 116 cites

Deep data QC

insufficient data to score

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay

ATAC-seq

Organism

Homo sapiens

Metrics (value · how obtained)

n content pct 0.932 measured

pct q20 bases 94.4 measured

pct q30 bases 92.4 measured

gc content pct 44.9 measured

mean read length 39.4 measured

mean base quality 33.7 measured

adapter content pct 0 measured

duplication rate pct 73.16 measured

How this grade was computed

The insufficient grade is a transparent weighted average. Each metric below scored from 0–100% against the published ATAC-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 92.4 measured ×1 100%

QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0