Corpus 1,284 assessed · 1,185 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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GSE138417

GEO first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

92/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This human RNA-Seq with unavailable metadata shows high quality (96.1% Q30) and mean read length of 51 bp. Missing details limit assessment.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.002 measured
pct q20 bases 98.8 measured
pct q30 bases 96.1 measured
gc content pct 48.4 measured
mean read length 51 measured
mean base quality 36.4 measured
adapter content pct 0.54 measured
duplication rate pct 51.81 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 92/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 96.1 measured ×1 100%
mean base quality 36.4 measured ×0.6 100%
adapter content pct 0.54 measured ×0.4 100%
duplication rate pct 51.81 measured ×0.4 52%
QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0