Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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GSE139013

GEO first seen 2023

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

90/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This mouse RNA-Seq with unavailable details shows high quality (95.5% Q30) and mean read length of 50 bp. Missing metadata prevents characterization.

Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct 0.001 measured
pct q20 bases 98.1 measured
pct q30 bases 95.5 measured
gc content pct 45.1 measured
mean read length 50 measured
mean base quality 38.9 measured
adapter content pct 0.4 measured
duplication rate pct 58.07 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 90/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 95.5 measured ×1 100%
mean base quality 38.9 measured ×0.6 100%
adapter content pct 0.4 measured ×0.4 100%
duplication rate pct 58.07 measured ×0.4 38%
QC cost 23 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0