Corpus 1,284 assessed · 1,185 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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GSE141169

GEO first seen 2020

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This human RNA-Seq with unavailable metadata shows high quality (91.6% Q30) and mean read length of 50 bp. Metadata gaps prevent platform identification.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.257 measured
pct q20 bases 98.1 measured
pct q30 bases 91.6 measured
gc content pct 48.3 measured
mean read length 50 measured
mean base quality 35.2 measured
adapter content pct 0 measured
duplication rate pct 19.82 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 91.6 measured ×1 100%
mean base quality 35.2 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 19.82 measured ×0.4 100%
QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0