Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE14323

GEO first seen 2013

RMA expression data for liver samples from subjects with HCV, HCV-HCC, or normal liver

Organism
Homo sapiens
Samples
124
Type
Expression profiling by arra...
Submitted
2009-01-07

The role of chronic hepatitis C virus (HCV) in the pathogenesis of HCV-associated hepatocellular carcinoma (HCC) is not completely understood, particularly at the molecular level. We studied gene expression in normal, pre-malignant (cirrhosis), and tumor (HCC) liver tissues using Affymetrix GeneChips.

Provenance — who produced it, who reused it

Linked to 49 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Valeria R MasDaniel G MalufKellie J ArcherKenneth YanekXiangrong KongLaura KulikChris E FreiseKim M OlthoffRafik M GhobrialPaula McIverRobert A Fisher
Reused by

43 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 2 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently