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Single-cell transcriptomic atlas of the mouse regenerating muscle tissue
We report a series of single-cell transcriptomic datasets of the mouse regenerating muscle tissue produced using the Chromium 10X technology.
Provenance — who produced it, who reused it
Linked to 9 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Benjamin D CosgroveAndrea J De MicheliLauren D Walter
Reused by
- Large-scale integration of single-cell transcriptomic data captu... 2021 · 219 cites
7 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
NextSeq 500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
10 / 10 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
135721982176
reported
total reads
2352333337
reported
supplementary file types
TXT
reported
QC cost
6 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently