Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE143476

GEO first seen 2020

Aging induces aberrant state transition kinetics in murine muscle stem cells

Organism
Mus musculus
Samples
16
Type
Expression profiling by high...
Submitted
2020-01-12

Label retaining and non-retaining muscle stem cells from young and aged H2B-GFP+/-;rtTA+/- were profiled by single cell RNA-seq at two timepoints

Provenance — who produced it, who reused it

Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Jacob C KimmelWallace F MarshallAndrew S Brack
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
Illumina NovaSeq 6000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
32 / 16 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 397682445960 reported
total reads 4418693844 reported
supplementary file types CSV, MTX, TSV reported
QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently