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Aging induces aberrant state transition kinetics in murine muscle stem cells
Label retaining and non-retaining muscle stem cells from young and aged H2B-GFP+/-;rtTA+/- were profiled by single cell RNA-seq at two timepoints
Provenance — who produced it, who reused it
Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Jacob C KimmelWallace F MarshallAndrew S Brack
Reused by
- Large-scale integration of single-cell transcriptomic data captu... 2021 · 219 cites
- Human skeletal muscle aging atlas 2024 · 172 cites
- Aging induces aberrant state transition kinetics in murine muscl... 2020 · 94 cites
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
Illumina NovaSeq 6000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
32 / 16 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
397682445960
reported
total reads
4418693844
reported
supplementary file types
CSV, MTX, TSV
reported
QC cost
22 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently