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GSE145281

GEO first seen 2021

High gene expression of IL8 in peripheral blood mononuclear cells from bladder cancer patients is associated with nonresponders to atezolizumab

Organism
Homo sapiens
Samples
18
Type
Expression profiling by high...
Submitted
2020-02-13

Elevated plasma interleukin-8 (IL8) has been associated with poor outcome to immune checkpoint blockade. Here we performed single cell RNAseq with peripheral blood mononuclear cells (PBMCs) of patients treated with atezolizumab (anti-PD-L1 mAb) from bladder cancer from a Phase II trial IMvigor210. We found that high IL8 gene expression is enriched in nonresponders to atezolizumab

Provenance — who produced it, who reused it

Linked to 8 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Kobe C YuenLifen LiuVinita GuptaShravan MadireddiShilpa KeerthivasanCongfen LiDeepali RishipathakPatrick WilliamsEdward E KadelHartmut KoeppenYing-Jiun ChenZora ModrusanJane L GroganRomain BanchereauNing LengAnnChristine ThastromXiadong ShenKenji HashimotoDarren TayamaMichiel S van der HeijdenJonathan E RosenbergDavid F McDermottThomas PowlesPriti HegdeMahrukh A HuseniSanjeev Mariathasan
Reused by

7 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Files available
TXT
Metrics (value · how obtained)
supplementary file types TXT reported
QC cost 6 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently