GSE147498
GEOProvenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
94/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Human RNA-seq with 75.5 bp reads exhibits moderate quality (92.5% Q20, 89.1% Q30) and elevated contamination indicators including 0.017% N-content and 44.6% GC skew. The mean base quality of 33.4 indicates lower-confidence basecalls; this dataset is suitable for abundance estimation but may introduce artifacts in variant calling or rare-transcript discovery.
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.