GSE147559
GEOProvenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
80/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Mouse bulk-RNA-seq with 98 bp reads at 91.5% Q20 and 80.7% Q30 shows moderate quality typical of older Illumina runs, though the Q30 rate of 80.7% suggests position-dependent quality decay. The 46.5% GC aligns with murine transcriptomes; suitable for gene-level abundance quantification and differential expression analysis, though junction-level or isoform studies may be compromised.
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.