Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE148802

GEO first seen 2020

Pharmacologic IRE1/XBP1s Activation Confers Targeted ER Proteostasis Reprogramming

Organism
Homo sapiens
Samples
15
Type
Expression profiling by high...
Submitted
2020-04-16

Activation of the IRE1/XBP1s signaling arm of the unfolded protein response (UPR) is a promising strategy to correct defects in endoplasmic reticulum (ER) proteostasis implicated in diverse diseases. However, no pharmacologic activators of this pathway identified to date are suitable for ER proteostasis remodeling through selective activation of IRE1/XBP1s signaling. Here, we use high-throughput screening to identify non-toxic compounds that induce ER proteostasis remodeling through IRE1/XBP1s a...

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Julia M GrandjeanEvan T PowersR L Wiseman
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
15 / 15 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 15902364650 reported
total reads 318047293 reported
supplementary file types XLSX reported
QC cost 8 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently