GSE149637

GEO first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Antagonistic control of myofiber size and muscle protein quality... 2021 · 73 cites

Deep data QC

91/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

This mouse RNA-Seq with unavailable details shows high quality (96.1% Q30) and mean read length of 101 bp with moderate adapter content (2.2%). Missing metadata prevent platform identification.

Data type / assay

bulk-RNA-seq

Organism

Mus musculus

Metrics (value · how obtained)

n content pct 0 measured

pct q20 bases 98.6 measured

pct q30 bases 96.1 measured

gc content pct 47.4 measured

mean read length 101 measured

mean base quality 36.3 measured

adapter content pct 2.2 measured

duplication rate pct 55.05 measured

How this grade was computed

Weighted mean of 4 scored metric(s) → 91/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 96.1 measured ×1 100%

mean base quality 36.3 measured ×0.6 100%

adapter content pct 2.2 measured ×0.4 99%

duplication rate pct 55.05 measured ×0.4 44%

QC cost 34 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0