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Chromatin accessibility changes of Fli1ko vs WT in CD8 T cells
Genetic deletion of Fli1 enhanced CD8 Effector responses
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Zeyu ChenE J Wherry
Reused by
- In vivo CD8+ T cell CRISPR screening reveals control by Fli1 in... 2021 · 217 cites
Deep data QC
insufficient data to scoreStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
ATAC-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct
0.079
measured
pct q20 bases
94
measured
pct q30 bases
91.3
measured
gc content pct
43.5
measured
mean read length
69.1
measured
mean base quality
33.8
measured
adapter content pct
0
measured
duplication rate pct
23.01
measured
How this grade was computed
The insufficient grade is a transparent weighted average. Each metric below scored from 0–100% against the published ATAC-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
91.3
measured
×1
100%
QC cost
30 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0