Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE151279

GEO first seen 2020

Metabolic Maturation Media Improves Physiological Function of Human iPSC-derived Cardiomyocytes

Organism
Homo sapiens
Samples
10
Type
Expression profiling by high...
Submitted
2020-05-27

iPSC-derived cardiomyocytes (iPSC-CMs) have enormous potential for the study of human cardiac disorders. However, their physiological immaturity severely limits their utility as a model system and their adoption for drug discovery. In this study, we describe a maturation media (MM) designed to provide oxidative substrates adapted to the metabolic needs of hiPSC-CMs as compared to standard RPMI/B27 media. RNA sequencing was performed to gain insight into the underlying molecular basis for the cha...

Provenance — who produced it, who reused it

Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

2 further papers cite this accession but reuse could not be confirmed.

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.007 measured
pct q20 bases 98.1 measured
pct q30 bases 94.9 measured
gc content pct 52.8 measured
mean read length 150 measured
mean base quality 39.1 measured
adapter content pct 0.31 measured
duplication rate pct 17.07 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 94.9 measured ×1 100%
mean base quality 39.1 measured ×0.6 100%
adapter content pct 0.31 measured ×0.4 100%
duplication rate pct 17.07 measured ×0.4 100%
QC cost 35 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0