Corpus 1,284 assessed · 1,185 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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GSE151976

GEO first seen 2021

RNA-seq analysis of iPSC-derived brain microvascular endothelial cells following long-term cryopreservation

Organism
Homo sapiens
Samples
9
Type
Expression profiling by high...
Submitted
2020-06-07

We report changes in gene expression from iPSC to iPSC-derived brain microvascular endothelial cells (dhBMECs) and from one-year cryopreservation of dhBMECs.

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Raleigh M LinvilleRobert YePeter C Searson
Reused by

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This human RNA-Seq with unavailable metadata shows high quality (95% Q30) and long mean read length of 150 bp with low adapter content (1.76%). Missing details limit assessment.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0 measured
pct q20 bases 98.1 measured
pct q30 bases 95 measured
gc content pct 50.9 measured
mean read length 150 measured
mean base quality 36.1 measured
adapter content pct 1.76 measured
duplication rate pct 23.75 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 95 measured ×1 100%
mean base quality 36.1 measured ×0.6 100%
adapter content pct 1.76 measured ×0.4 100%
duplication rate pct 23.75 measured ×0.4 100%
QC cost 33 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0