Corpus 1,276 assessed · 1,177 scored · 644 reproduced ≥75 · 170 flagged ·∅ 74/100
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GSE15229

GEO first seen 2015

Massively Parallel Sequencing Identifies the MicroRNA Transcriptome of Normal and Malignant Human B cells

Organism
Homo sapiens
Samples
31
Type
Non-coding RNA profiling by...
Submitted
2009-03-13

Profiling of miRNA transcriptome in Human mature B cells from similar populations

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Dereje D JimaJenny ZhangSandeep S Dave
Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina Genome Analyzer
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
31 / 31 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 6428014328 reported
total reads 176319581 reported
supplementary file types TXT, XLS reported
QC cost 15 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently