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Single-cell RNA-seq data of Arabidopsis root
We report both raw and processed scRNA-seq data that are used to build transcriptomic atlas of Arabidopsis root.
Provenance — who produced it, who reused it
Linked to 4 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Rachel ShahanChe-Wei HsuTrevor NolanBenjamin J ColeIsaiah W TaylorLaura GreenstreetStephen ZhangAnton AfanassievAnna VlotGeoffrey SchiebingerPhilip N BenfeyUwe Ohler
Reused by
2 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
QC cost
23 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently