Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE155027

GEO

Provenance — who produced it, who reused it

Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

No linked papers found in the corpus yet.

Deep data QC

89/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human bulk-RNA-seq with 151 bp reads at 97.7% Q20 and 93.3% Q30 across 928 million bases provides high-quality paired-end data for isoform discovery. The 50.4% GC and mean quality 35.9 with minor 13.87% adapter contamination (post-trim) support comprehensive transcript characterization in human tissues.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Files available
TXT
Metrics (value · how obtained)
n content pct 0 measured
pct q20 bases 97.7 measured
pct q30 bases 93.3 measured
gc content pct 50.4 measured
mean read length 151 measured
mean base quality 35.9 measured
adapter content pct 13.87 measured
duplication rate pct 29.15 measured
supplementary file types TXT reported
How this grade was computed
Weighted mean of 4 scored metric(s) → 89/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.3 measured ×1 100%
mean base quality 35.9 measured ×0.6 100%
adapter content pct 13.87 measured ×0.4 34%
duplication rate pct 29.15 measured ×0.4 100%

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0

Scientific quality

Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.

1 studies use it 1 reproduced mean score 94