Corpus 1,275 assessed · 1,176 scored · 644 reproduced ≥75 · 170 flagged ·∅ 74.1/100
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GSE15654

GEO first seen 2020

Gene-expression profiles of hepatitis C-related, early-stage liver cirrhosis

Organism
Homo sapiens
Samples
216
Type
Expression profiling by arra...
Submitted
2009-04-13

BACKGROUND & AIMS: Cirrhosis affects 1% to 2% of the world population and is the major risk factor for hepatocellular carcinoma (HCC). Hepatitis C cirrhosis-related HCC is the most rapidly increasing cause of cancer death in the United States. Noninvasive methods have been developed to identify patients with asymptomatic early-stage cirrhosis, increasing the burden of HCC surveillance, but biomarkers are needed to identify patients with cirrhosis who are most in need of surveillance. We investig...

Provenance — who produced it, who reused it

Linked to 11 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Yujin HoshidaAugusto VillanuevaAngelo SangiovanniManel SoleJoshua GouldSupriya GuptaBradley TaylorAndrew CrenshawStacey GabrielBeatriz MinguezMassimo IavaroneScott FriedmanMassimo ColomboJosep M LlovetTodd R Golub
Reused by

7 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 23 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently