A human cell atlas of fetal gene expression
The gene expression program underlying the specification of human cell types is of fundamental interest. We generated human cell atlases of gene expression and chromatin accessibility in fetal tissues. For gene expression, we applied three-level combinatorial indexing to >110 samples representing 15 organs, profiling ~4 million single cells. We leveraged the literature and other atlases to identify and annotate hundreds of cell types and subtypes, both within and across tissues. Our analyses foc...
Provenance — who produced it, who reused it
Linked to 11 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- A transcription factor atlas of directed differentiation 2023 · 225 cites
- scJoint integrates atlas-scale single-cell RNA-seq and ATAC-seq... 2022 · 172 cites
- Universal prediction of cell-cycle position using transfer learn... 2022 · 129 cites
- CD70 as an actionable immunotherapeutic target in recurrent glio... 2022 · 79 cites
6 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently