Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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GSE157597

GEO first seen 2021

Polyamine metabolism regulates the T cell epigenome through hypusination [ATAC-seq]

Organism
Mus musculus
Samples
56
Type
Genome binding/occupancy pro...
Submitted
2020-09-07

We report here a central role for polyamines in T cell differentiation and function. Deficiency in ornithine decarboxylase (ODC), a critical enzyme for polyamine synthesis, resulted in a profound failure of CD4+ T cells to adopt correct subset specification, underscored by ectopic expression of multiple cytokines and lineage- defining transcription factors across TH1, TH2, TH17, and Treg polarizing conditions, and enhanced colitogenic potential. T cells deficient in deoxyhypusine synthase (DHPS)...

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Daniel J PulestonFrancesc BaixauliDavid E SaninMatteo VillaAgnieska KabatMarcin M KaminskiHauke WeissKatarzyna GrzesLea J FlachsmannCameron S FieldMichal StanczakLena SchimmelpfennigFabian HasslerChao WangNir YosefVijay K KuchrooYaarub MusaGerhard MittlerJoerg M BuesscherStefan BalabanovEdward J PearceDouglas R GreenErika L Pearce
Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 32 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently