Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE16134

GEO first seen 2019

Bacterial Correlates of Gingival Gene Expression

Organism
Homo sapiens
Samples
310
Type
Expression profiling by arra...
Submitted
2009-05-15

We investigated the association between subgingival bacterial profiles and gene expression patterns in gingival tissues of patients with periodontitis.

Provenance — who produced it, who reused it

Linked to 56 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Ryan T DemmerPanos N PapapanouPaul Pavlidis
Reused by

54 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 19 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently