UCSF-UBC Human Reference Epigenome Mapping Project
The epigenome is the dynamic interface between our changing environment and the static genome, and understanding it is a goal of immense importance to human health. We will map reference cell epigenomes of the brain, breast, blood and approved embryonic stem cells, inclusive of males and females and different racial groups. This cooperative work will transform our understanding of the short and long-lasting consequences of environment impact on human health and disease. We are working cooperati...
Provenance — who produced it, who reused it
Linked to 15 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Functional DNA methylation differences between tissues, cell typ... 2013 · 203 cites
- The tandem duplicator phenotype as a distinct genomic configurat... 2016 · 127 cites
- Distinctive epigenomes characterize glioma stem cells and their... 2018 · 104 cites
- The proliferative history shapes the DNA methylome of B-cell tum... 2020 · 104 cites
- Epigenomic footprints across 111 reference epigenomes reveal tis... 2015 · 100 cites
- Chromatin signature of widespread monoallelic expression 2013 · 85 cites
- Mapping of Variable DNA Methylation Across Multiple Cell Types D... 2016 · 81 cites
7 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently