Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE16391

GEO first seen 2012

GGI: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1-98 trial

Organism
Homo sapiens
Samples
55
Type
Expression profiling by arra...
Submitted
2009-06-02

Background: We have previously shown that the Gene expression Grade Index (GGI) was able to identify two subtypes of estrogen receptor (ER)-positive tumors that were associated with statistically distinct clinical outcomes in both untreated and tamoxifen-treated patients. Here, we aim to investigate the ability of the GGI to predict relapses in postmenopausal women who were treated with tamoxifen (T) or letrozole (L) within the BIG 1-98 trial. Methods: We generated gene expression profiles (Affy...

Provenance — who produced it, who reused it

Linked to 22 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Christine DesmedtAnita Giobbie-Hurderpatrick NevenRobert ParidaensMarie-Rose ChristiaensAnn SmeetsFrançoise LallemandBenjamin Haibe-KainsGiuseppe VialeRichard D GelberMartine J PiccartChristos Sotiriou
Reused by

15 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 19 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently