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Tcf1/Lef1 transcription factors and CD8 T cell identity [RNA-seq]
Comparison of transcriptomes between WT and Tcf1/Lef1-deficient naïve CD8+ T cells
Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Hai-Hui XueWeiqun PengXiang Li
Reused by
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
100/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct
0.016
measured
pct q20 bases
97.1
measured
pct q30 bases
95.2
measured
gc content pct
50
measured
mean read length
50
measured
mean base quality
38
measured
adapter content pct
0.05
measured
duplication rate pct
17.49
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 100/100
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
95.2
measured
×1
100%
mean base quality
38
measured
×0.6
100%
adapter content pct
0.05
measured
×0.4
100%
duplication rate pct
17.49
measured
×0.4
100%
QC cost
28 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0