← Dataset search
miRNA expression of human cancer and mouse cell lines
miRNA expression profile
Provenance — who produced it, who reused it
Linked to 5 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Christine MayrDavid P Bartel
Reused by
- MINTmap: fast and exhaustive profiling of nuclear and mitochondr... 2017 · 190 cites
- A highly expressed miR-101 isomiR is a functional silencing smal... 2013 · 104 cites
3 further papers cite this accession but reuse could not be confirmed.
Deep data QC
83/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct
0.011
measured
pct q20 bases
95.3
measured
pct q30 bases
93.6
measured
gc content pct
45.9
measured
mean read length
36
measured
mean base quality
38.2
measured
adapter content pct
0
measured
duplication rate pct
81.77
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 83/100
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
93.6
measured
×1
100%
mean base quality
38.2
measured
×0.6
100%
adapter content pct
0
measured
×0.4
100%
duplication rate pct
81.77
measured
×0.4
0%
QC cost
28 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0