GSE16785

Wound-induced gene expression changes in Populus: 90 hours; clone RM5

Organism

Populus sp.; Populus fremontii x Populus angustifolia

Samples

8

Type

Expression profiling by arra...

Submitted

2009-06-24

Gene expression response of Populus plants subjected to leaf wounding was analyzed using the Affymetrix poplar genome microarrays.

Provenance — who produced it, who reused it

Linked to 7 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by

Scott A HardingChung-Jui Tsai

Reused by

Hsf and Hsp gene families in Populus: genome-wide identification... 2015 · 152 cites
Genome-wide analysis of the Populus Hsp90 gene family reveals di... 2013 · 113 cites
Genome-wide identification, characterization and expression anal... 2013 · 96 cites
Genome-Wide Identification, Classification, and Expression Analy... 2015 · 76 cites

3 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay

microarray-expr

Organism

Populus sp.; Populus fremontii x Populus angustifolia

Read type

not sequencing

Files available

CEL

Metrics (value · how obtained)

supplementary file types CEL reported

QC cost 1 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently