Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE17907

GEO first seen 2012

Molecular profiling of ERBB2-amplified breast cancers

Organism
Homo sapiens
Samples
109
Type
Expression profiling by arra...
Submitted
2009-09-01

15-25% of breast cancers (BC) show ERBB2-amplification and overexpression of the encoded ERBB2 tyrosine kinase receptor. They are associated with a poor prognosis but can benefit from targeted therapy. A better knowledge of these BCs may help understand their behavior and design new therapeutic strategies. In this study, we defined the high resolution genome and gene expression profiles of 54 ERBB2-amplified BCs using 244K oligonucleotide array-comparative genomic hybridization and whole-genome...

Provenance — who produced it, who reused it

Linked to 38 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
F SircoulombP FinettiJ AdelaïdeF BertucciD BirnbaumM Chaffanet
Reused by

28 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
genotype
Organism
Homo sapiens
Files available
CEL, TXT
Metrics (value · how obtained)
supplementary file types CEL, TXT reported
QC cost 4 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently