Corpus 1,273 assessed · 1,174 scored · 643 reproduced ≥75 · 169 flagged ·∅ 74.1/100
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GSE18851

GEO first seen 2015

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

88/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

Data type / assay
bulk-RNA-seq
Organism
Aspergillus oryzae
Metrics (value · how obtained)
n content pct 0.017 measured
pct q20 bases 94.3 measured
pct q30 bases 89.3 measured
gc content pct 49.9 measured
mean read length 44 measured
mean base quality 37.3 measured
adapter content pct 0.01 measured
duplication rate pct 58.19 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 88/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 89.3 measured ×1 97%
mean base quality 37.3 measured ×0.6 100%
adapter content pct 0.01 measured ×0.4 100%
duplication rate pct 58.19 measured ×0.4 37%
QC cost 28 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0