Corpus 1,273 assessed · 1,174 scored · 643 reproduced ≥75 · 169 flagged ·∅ 74.1/100
← Dataset search

GSE19234

GEO first seen 2016

Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival.

Organism
Homo sapiens
Samples
44
Type
Expression profiling by arra...
Submitted
2009-12-01

Although remission rates for metastatic melanoma are generally very poor, some patients can survive for prolonged periods following metastasis. We used gene expression profiling, mitotic index (MI), and quantification of tumor infiltrating leukocytes (TILs) and CD3+ cells in metastatic lesions to search for a molecular basis for this observation and to develop improved methods for predicting patient survival. We identified a group of 266 genes associated with postrecurrence survival. Genes posit...

Provenance — who produced it, who reused it

Linked to 45 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Dusan BogunovicDavid O'NeillIlana Belitskaya-LevyVladimir VacicYu Yi-LoSylvia AdamsFarbod DarvishianRussell BermanRichard ShapiroAnna C PlavlickStefano LonardiJiri ZavadilIman OsmanNina Bhardwaj
Reused by

43 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 1 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently