Microarray-based molecular subtyping of breast cancer
The primary goal of this study is to identify molecular subtypes of breast cancer through gene expression profiles of 327 breast cancer samples and determine molecular and clinical characteristics of different breast cancer subtypes. We studied expression signatures of different cellular functions (e.g., cell proliferation/cell cycle, wound response, tumor stromal response, vascular endothelial normalization, drug esponse genes, etc.) in different breast cancer molecular subtypes and investigate...
Provenance — who produced it, who reused it
Linked to 182 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Survival analysis across the entire transcriptome identifies bio... 2021 · 1,740 cites
- SurvExpress: An Online Biomarker Validation Tool and Database fo... 2013 · 716 cites
- Metabolic enzyme expression highlights a key role for MTHFD2 and... 2014 · 594 cites
- MYC-driven accumulation of 2-hydroxyglutarate is associated with... 2013 · 470 cites
- Aerobic glycolysis tunes YAP/TAZ transcriptional activity 2015 · 420 cites
- MiR-770 suppresses the chemo-resistance and metastasis of triple... 2018 · 190 cites
- Amplification and high-level expression of heat shock protein 90... 2012 · 183 cites
- Changes of N6-methyladenosine modulators promote breast cancer p... 2019 · 168 cites
- Prognostic microRNA/mRNA signature from the integrated analysis... 2013 · 153 cites
- Downregulation of long noncoding RNA MALAT1 induces epithelial-t... 2015 · 151 cites
- A four-long non-coding RNA signature in predicting breast cancer... 2014 · 148 cites
- EMT is associated with an epigenetic signature of ECM remodeling... 2019 · 148 cites
- BreastMark: An Integrated Approach to Mining Publicly Available... 2013 · 143 cites
- HMGA1 promotes metastatic processes in basal-like breast cancer... 2013 · 134 cites
- Shortening of 3′UTRs Correlates with Poor Prognosis in Breast an... 2012 · 123 cites
- Portraying breast cancers with long noncoding RNAs 2016 · 116 cites
- Expression profiling of ion channel genes predicts clinical outc... 2013 · 115 cites
- The RNA-binding protein AKAP8 suppresses tumor metastasis by ant... 2020 · 109 cites
- FAM83D promotes cell proliferation and motility by downregulatin... 2013 · 108 cites
- Exploring the role of sphingolipid-related genes in clinical out... 2023 · 100 cites
- C5aR1-positive neutrophils promote breast cancer glycolysis thro... 2021 · 99 cites
- The Lineage Determining Factor GRHL2 Collaborates with FOXA1 to... 2019 · 92 cites
- Integrating single-cell RNA-seq and bulk RNA-seq to construct pr... 2023 · 90 cites
- Concurrent Gene Signatures for Han Chinese Breast Cancers 2013 · 84 cites
- Identification of a five‐lncRNA signature for predicting the ris... 2018 · 77 cites
- Development and validation of a hypoxia‑related prognostic signa... 2020 · 73 cites
54 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently