Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE22058

GEO first seen 2012

miR-122 as a Regulator of Mitochondrial Metabolic Gene Network in Hepatocellular Carcinoma

Organism
Homo sapiens; Mus musculus
Samples
397
Type
Expression profiling by arra...
Submitted
2010-05-30

Hepatocellular carcinoma (HCC) is the leading cause of cancer-related deaths worldwide, reflecting the need for a better understanding of hepatocarcinogenesis. In this study, we examined the genome-wide expression profiles of both miRNAs and mRNAs from paired tumor and adjacent non-tumor tissues from a cohort of 96 HCC patients in Hong Kong where hepatitis B virus (HBV) is endemic. The comprehensive analysis of the coordinate expression of miRNAs and mRNAs reveals that miR-122 is under-expressed...

Provenance — who produced it, who reused it

Linked to 80 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Julja BurchardChunsheng ZhangAngela M LiuNikki P LeeKwong-Fai WongRonnie T PoonPark C ShamBrian Y LamMark D FergusonGeorge TokiwaRyan SmithBrendan LeesonRebecca BeardJohn R LambLee LimMao MaoHongyue DaiJohn M Luk
Reused by

62 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens; Mus musculus
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 1 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently