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Gene expression breast cancer
Gene expression profiles were generated from 176 primary breast cancer patients and 10 normal breast samples. This data is used to investigate the clinial relevance of genes of interest from in vitro studies, including FABP5 and DDX1.
Provenance — who produced it, who reused it
Linked to 26 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Kathryn GrahamJohn Mackey
Reused by
- Genomic Loss of Tumor Suppressor miRNA-204 Promotes Cancer Cell... 2012 · 162 cites
- Aldehyde dehydrogenase 1A3 influences breast cancer progression... 2014 · 128 cites
- A UBE2O-AMPKα2 Axis that Promotes Tumor Initiation and Progressi... 2017 · 126 cites
- Piwi-interacting RNAs and PIWI genes as novel prognostic markers... 2016 · 92 cites
- Next generation sequencing profiling identifies miR-574-3p and m... 2015 · 78 cites
- Stabilization of IGF2BP1 by USP10 promotes breast cancer metasta... 2022 · 77 cites
- Profiling of Small Nucleolar RNAs by Next Generation Sequencing:... 2016 · 75 cites
- PTEN self-regulates through USP11 via the PI3K-FOXO pathway to s... 2019 · 75 cites
- CRABP1 is associated with a poor prognosis in breast cancer: add... 2015 · 73 cites
17 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
TXT
Metrics (value · how obtained)
supplementary file types
TXT
reported
QC cost
11 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently