Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE26639

GEO first seen 2012

Expression Data from 226 patients of the REMAGUS02 trial

Organism
Homo sapiens
Samples
226
Type
Expression profiling by arra...
Submitted
2011-01-14

Identification of predictive markers of response to treatment is a major objective in breast cancer. A major problem in clinical sampling is the variability of RNA templates, requiring accurate management of tumour material and subsequent analyses for future translation in clinical practice. Our aim was to establish the feasibility and reliability of high throughput RNA analysis in a prospective trial. Our data showed that strict quality criteria for RNA integrity assessment and well calibrated...

Provenance — who produced it, who reused it

Linked to 13 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Patricia de CremouxFabien ValetDavid GentienJacqueline Lehmann-cheVéronique ScottCarine Tran-PerennouCatherine BarbarouxNicolas ServantSophie VacherBrigitte Sigal-ZafraniMarie-Christine MathieuPhilippe BertheauJean-Marc GuinebretièreBernard AsselainMichel MartyFrédérique Spyratos
Reused by

9 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 9 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently